Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790135.1_cds_XP_016500040.1_1320
CDS Infomation

[gene=LOC107818520] [db_xref=GeneID:107818520] [protein=tetratricopeptide repeat protein 7A-like] [protein_id=XP_016500040.1] [location=complement(join(11836..12146,12247..12394,12582..13786,13990..14248,14412..14612))] [gbkey=CDS]
Sequence

ATGTTGTGTGCTTGTTCAGGAGAGCAATTCAAATTTGATGAGCCACCACCACAGTCTCCA
GAGTCATTGGCCACTAGGGATTTCTCAGCCAGTGGCCTTTCTTCAAGAACTGGAACAGTA
GATTGGGATTCAAAACTTGAAGATGCTCAAGTTGATGAAGTTGAATCAACTTTAAAAGAG
GCACTTTCCTTGAATTATGAGGAAGCAAGAGCATTGCTGGGGAGGCTAGAATACCAAAGA
GGGAATTTTGATGCTGCTCTTCATGTGTTTCAGGGAATAGATATTAGAACCCTGTCCTCG
AGAATGTCTAAGGCCATTGCTGAGAGAACGAGGCCTTTAAAACCGCGCTCCAAATGTGAT
ATTGTGCCTGCTGGTGTGATGTCACTGCATTCAGTGAGTCTACTTCTTGAAGCAATTTTA
CTGAAAGCTAAATCTTTAGAGGAGCTCAGCCGAATCAAAGATGCTGCTAAGGAGTGCAAA
ATGATATTGGATGTTGTCGATTCAGCATTGCCGAATGGAATACCAGAGGGGATTTCGGAA
GACTGTAAGTTGCTGGAGATGTTTCATAAAGCGCTTGAGTTACTTCCAAAGTTATGGATA
CAAGCAGGGTATTTGGATGAAGCTGTGCTTGCATATCGAAGGGCTCTAGTCAAGCCATGG
AATTTGGATTCCCAAAGATTGGCCTGTATACAAAAGGACTTAGCTGCCACTTTACTCTTT
GGAGGGGTTGAAGTTGAGGTTCCTGCTCAATTTCAAGTGTGTGGTTCGACCGCCCCAAAA
AATAACTTGGAGGAAGCAATTCTCTTGTTGTTTGTACTCATGAGCAAAATGCTAAATGGT
CAAATAGAATGGGATTCTGAAATTATGAACCATTTGACTTTCGCGCTGACAATTTCTGGC
CACTCTGAGTCTCTTGCAGATCATATTGAGCAGGTTTTACCAGGAATCTATACCCGAGCT
GAGAGATGGTATCTTCTTGCGCTTTGTTACAGTGCTGCAGGTCAGAATGATACAGCGTTG
AATCTTGTCAAGAAAATTTCTGGATGTTCAGAAGCCAACCAAGAACCTCATATTCCGTCT
CTCTTGTTGGGAGCAAAGCTGTGTTCTCAGGATCTGCAGCAAGCCCATGAGGGGATAAAT
TTTGCTCGTGCAGTAATTAATTTGGCGAAAAATCAAAACGAACATTTCCTAGTTCAGGCT
CATAAACTTCTTGGGGTCTGCTATGGAAATGCTGCAAGAATATCCATTTCAGATTTTGAA
AGAAATTTCTGCCAAAGAGAAGCATTAGCAGCCTTAAACTCTACTTTTGCAACTTGCAAG
GAGGATCCAGAAATTTTATTTAGTCTTGGATTGGAAAATGCCATCCAAAGAAATTTGACT
CCCGCTTTTAATAATGTAATGCGGTACTCAGAAATGGTGGCTGGAAGCACGACCAGAGCT
TGGAAATTGTTGGCTTTAGTTGTTTCTGCAGAACAAAGATTCAAAGATGCGGAAGCCATA
GTTGATCTTGCTTTCGATGAGACTGGAAAGGTTGACCAGATGGAATATCTCAGACTAAAA
GCTGTCCTGCAAATAGCTCAACAACAGCCCAAGCAAGCCATAGAGACGTACAGGATTCTG
TTGGCTTTGATTCAAGCACAAAAGGAGTCCACGACAGATGATGAGGTAACAGCTCAAAGA
AGATTGGAAGTTGAAGCATGGCTTGATTTATCAAGTTTATACACAGATCTAGAGTCATGG
CGTGATGCCGAAATATGTATAAACAAAGCCAAAGCAATTCAATTTTACTGCCCTCGGAAT
TGGCATGCAACAGGTGCACTATTTCAAGCCAAAGCAAGAGATAAGGAAGCACTTGTTGCA
CTCTCAGTGTCTCTGTCGATAGAACCAGATTATATCCCCAGTATCGTTTCTACCGCTCAA
GTGCTTATGAAGATGGGTAACGACACAGTCCCTATTGCGAGAAGCTTTTTAATGAATGCT
CTGCGATTAGAACCCACAAATCATGATGCGTGGTTTAACCTTGGAATGCTAGCAAAGATG
GAAGGCTCACTACAGCAAGCGGCAGATTTTTTCCAAGCTGCACATGAGTTGAAGATTTCT
GCTCCAGTTCAAAGTTTTGTCTGA

Peptide Sequence

PEP ID

XP_016500040.1
PEP Infomation

PREDICTED: tetratricopeptide repeat protein 7A-like [Nicotiana tabacum]
Sequence

MLCACSGEQFKFDEPPPQSPESLATRDFSASGLSSRTGTVDWDSKLEDAQVDEVESTLKE
ALSLNYEEARALLGRLEYQRGNFDAALHVFQGIDIRTLSSRMSKAIAERTRPLKPRSKCD
IVPAGVMSLHSVSLLLEAILLKAKSLEELSRIKDAAKECKMILDVVDSALPNGIPEGISE
DCKLLEMFHKALELLPKLWIQAGYLDEAVLAYRRALVKPWNLDSQRLACIQKDLAATLLF
GGVEVEVPAQFQVCGSTAPKNNLEEAILLLFVLMSKMLNGQIEWDSEIMNHLTFALTISG
HSESLADHIEQVLPGIYTRAERWYLLALCYSAAGQNDTALNLVKKISGCSEANQEPHIPS
LLLGAKLCSQDLQQAHEGINFARAVINLAKNQNEHFLVQAHKLLGVCYGNAARISISDFE
RNFCQREALAALNSTFATCKEDPEILFSLGLENAIQRNLTPAFNNVMRYSEMVAGSTTRA
WKLLALVVSAEQRFKDAEAIVDLAFDETGKVDQMEYLRLKAVLQIAQQQPKQAIETYRIL
LALIQAQKESTTDDEVTAQRRLEVEAWLDLSSLYTDLESWRDAEICINKAKAIQFYCPRN
WHATGALFQAKARDKEALVALSVSLSIEPDYIPSIVSTAQVLMKMGNDTVPIARSFLMNA
LRLEPTNHDAWFNLGMLAKMEGSLQQAADFFQAAHELKISAPVQSFV

Transcript Sequence

Gene sequence data has not been registered.